IVE Software Available for Download

Much of the software used in David Agard's and John Sedat's libraries at UCSF is now available for download. We provide the software as is, and though we are interested in your feedback (which may be directed to ive@msg.ucsf.edu), we can not guarantee support or assistance for downloaded software. If you are interested in receiving email announcements about changes to the available software, send an email with the subject, "IVE subscription request" to ive-web@msg.ucsf.edu. Include the email address to be used for announcements in the body of the email or leave the body blank if announcements should be sent to the sender listed in the email's headers.

ER-Decon

If you are interested in an implementation of the deconvolution algorithm, ER-Decon, described in Arigovindan M, et al (2013), High-resolution restoration of 3D structures from images with extreme low signal-to-noise-ratio, Proceedings of the National Academy of Sciences of the United States of America, 110(43): 17344-17349, and have already completed a license agreement, please proceed to http://msg.ucsf.edu/IVE/Download/erdecon/ to access a version of Priism which includes ER-Decon. If you want to license ER-Decon, have your institution's licensing department complete the licensing agreement in http://msg.ucsf.edu/IVE/Download/ER-Decon-license.pdf and email the completed agreement to ive-web@msg.ucsf.edu. In the email, please include the email address or addresses of the individuals who will act as contacts. Upon the receipt of the license agreement, we will email those contacts the password to access the software. If you forget the password, those contacts may request a new password by sending an email to ive-web@msg.ucsf.edu.

License

By downloading the Priism or IM library software packages, you agree to the following conditions,

Software packages

Priism 4

Includes a collection of tools for analysis and visualization of 5D data. Includes software for aligning and reconstructing single axis tilt series data from a transmission electron microscope. The current version is 4.6.1 which was released November 14, 2016.

IM Library

Provides a C/C++ and Fortran interface for reading and writing the image files used by Priism.


IVE/Priism home page


modified January 11, 2017.

IVE Development Team (ive-web@msg.ucsf.edu)
Macromolecular Structure Group, UCSF (http://msg.ucsf.edu)