People

david.jpg

David Agard, PhD

Professor

Department of Biochemistry and Biophysics

Discovering the Structural Basis for Biological Function at the Molecular and Cellular Levels

Our research is focused on elucidating the mechanism of Hsp90 chaperone function and its role in human disease, microtubule nucleation and centrosome structure, and the structure and cell biology of phage-encoded tubulins.

In efforts to understand the spatial and temporal regulation of tubulin polymerization into microtubules (MTs), we seek to understand, in atomic detail, the molecular mechanisms underlying dynamic MT behavior and MT nucleation.

yifan.jpg

Yifan Cheng, PhD

Associate Professor

Biochemistry and BIophysics

We are interested in studying the three-dimensional structures of macromolecular complexes: their structural architectures, the regulation of their function and the dynamic processes of their assembly and disassembly, by molecular electron microscopy (cryoEM). A full understanding of the biological functions/processes of any macromolecular complex requires structural information at a wide range of resolutions, including atomic details of its components, spatial arrangements of these components and interactions between them.

charles.jpg

Charles Craik, PhD

Professor

P_Pharmaceutical Chemistry

My research interests focus on defining the roles and the mechanisms of enzymes and other challenging proteins in complex biological processes and on developing technologies to facilitate these studies. The current research in the Craik lab focuses on the chemical biology of proteolytic and protein degradation enzymes, receptors and membrane transporters. A particular emphasis of our work is on identifying the roles and regulating the activity of key proteins associated with infectious diseases, neurodegeneration and cancer.

james.jpg

James Fraser, PhD

Department Chair and Professor

Bioengineering

The long-term goals of our research are to understand how protein conformational ensembles are reshaped by perturbations, such as mutation and ligand binding, and to quantify how these perturbations impact protein function and organismal fitness. To accomplish these goals, we create new computational and biophysical approaches to study how proteins move between different conformational states.

gross.jpg

John Gross, PhD

Professor

Pharmaceutical Chemistry

We investigate molecular machines that coordinate gene expression or antiviral immunity. Research areas include : i- RNA decay enzymes that act in mRNA quality control and gene regulatory pathways, and ii- nucleic acid based immune systems that protect animals from viruses and neutralization of these systems by viral accessory proteins. We use tools from molecular biophysics to understand the structure and regulatory conformational dynamics in these systems with the ultimate goal of defining molecular mechanisms and avenues for structure based drug design.

aashish.jpg

Aashish Manglik, MD, PhD

Associate Professor

Department of Pharmaceutical Chemistry

Aashish was an undergraduate at Washington University in St. Louis, where he worked in the lab of Jeff McKinney on Salmonella-host interactions. He moved to California in 2008 to join the Stanford Medical Scientist Training Program.

stroud.jpg

Robert Stroud, MA, PhD

Professor

Department of Biochemistry and Biophysics

We seek to understand molecular mechanisms of certain key biological processes, as well as signal transduction between processes at the level of protein structure, dynamics, and mechanism. Molecular cloning, expression, site-directed mutagenesis, and strong focus onto biochemistry are a key part of the arsenal for defining molecular mechanisms. We focus on the questions of how signals cross membranes, and how membrane proteins and membrane channels work at the level of atomic structure.